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    ligD non-homologous end-joining DNA ligase [ Agrobacterium fabrum str. C58 ]

    Gene ID: 1137413, updated on 27-Aug-2024

    Summary

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    Gene symbol
    ligD
    Gene description
    non-homologous end-joining DNA ligase
    Locus tag
    ATU_RS23450
    Gene type
    protein coding
    Organism
    Agrobacterium fabrum str. C58 (strain: C58, culture-collection: ATCC:33970, type-material: type strain of Agrobacterium fabrum)
    Lineage
    Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex
    Old locus tag
    AGR_pTi_171; Atu6090
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    Genomic context

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    Location:
    plasmid: Ti
    Sequence:
    NC_003065.3 (107937..108998, complement)

    NC_003065.3Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette domain-containing protein Neighboring gene LysR family transcriptional regulator Neighboring gene pseudo Neighboring gene pseudo Neighboring gene ImuA family protein Neighboring gene DNA polymerase Y family protein Neighboring gene error-prone DNA polymerase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003065.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    non-homologous end-joining DNA ligase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003065.3 Reference assembly

      Range
      107937..108998 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_010974872.1 MULTISPECIES: non-homologous end-joining DNA ligase [Agrobacterium]

      See identical proteins and their annotated locations for WP_010974872.1

      UniProtKB/TrEMBL
      A0A2Z2PIW2, A0A2Z2PP40, A0A2Z2PUX0, A9CKW9
    Nucleotide Protein
    Heading Accession and Version