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    fuom fucose mutarotase [ Maylandia zebra (zebra mbuna) ]

    Gene ID: 101484422, updated on 8-Mar-2024

    Summary

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    Gene symbol
    fuom
    Gene description
    fucose mutarotase
    See related
    Ensembl:ENSMZEG00005003987
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Maylandia zebra
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
    Orthologs
    human zebrafish all
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    Genomic context

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    See fuom in Genome Data Viewer
    Location:
    chromosome: LG13
    Exon count:
    6
    Annotation release Status Assembly LG Location
    104 current M_zebra_UMD2a (GCF_000238955.4) LG13 NC_036792.1 (17944626..17946312)
    101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531755.1 (1290679..1292368)

    Linkage Group LG13 - NC_036792.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosome-associated GTPase 1 Neighboring gene enoyl CoA hydratase, short chain, 1, mitochondrial Neighboring gene muscle segment homeobox 3 Neighboring gene zinc finger protein 511

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fucose binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables racemase and epimerase activity, acting on carbohydrates and derivatives IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fucose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fucosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fucose mutarotase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference M_zebra_UMD2a Primary Assembly

    Genomic

    1. NC_036792.1 Reference M_zebra_UMD2a Primary Assembly

      Range
      17944626..17946312
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004555894.3 → XP_004555951.1  fucose mutarotase isoform X1

      See identical proteins and their annotated locations for XP_004555951.1

      UniProtKB/TrEMBL
      A0A3P9B5J8
      Related
      ENSMZEP00005005155.1, ENSMZET00005005380.1
      Conserved Domains (1) summary
      cl00809
      Location:4 → 151
      RbsD_FucU; RbsD / FucU transport protein family

    2. XM_004555895.3 → XP_004555952.1  fucose mutarotase isoform X2

      See identical proteins and their annotated locations for XP_004555952.1

      Conserved Domains (1) summary
      cl00809
      Location:4 → 128
      RbsD_FucU; RbsD / FucU transport protein family
    Nucleotide Protein
    Heading Accession and Version

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