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    yjgN inner membrane protein YjgN [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948784, updated on 2-May-2024

    Summary

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    Gene symbol
    yjgN
    Gene description
    inner membrane protein YjgN
    Primary source
    ASAP:ABE-0013944
    Locus tag
    b4257
    See related
    ECOCYC:G7887
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4250
    Summary
    YjgN is an inner membrane protein with eight predicted transmembrane domains. [More information is available at EcoCyc: G7887].
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    Genomic context

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    Sequence:
    NC_000913.3 (4479730..4480926)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ribonuclease E inhibitor protein B Neighboring gene putative N-acetyltransferase YjgM Neighboring gene valine--tRNA ligase Neighboring gene DNA polymerase III subunit chi

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Zhang N, et al. Proteomics, 2007 Feb. PMID 17309111
    2. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    3. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    4. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    inner membrane protein YjgN

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4479730..4480926
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_026288.1 inner membrane protein YjgN [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for YP_026288.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5D8MCR0
      Conserved Domains (1) summary
      COG4269
      Location:1 → 397
      YjgN; Uncharacterized membrane protein YjgN, DUF898 family [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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