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    CARTPT CART prepropeptide [ Orcinus orca (killer whale) ]

    Gene ID: 101269880, updated on 8-Mar-2024

    Summary

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    Gene symbol
    CARTPT
    Gene description
    CART prepropeptide
    See related
    EnsemblRapid:ENSOORG00010004991
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Orcinus orca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
    Orthologs
    human mouse all
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    Genomic context

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    See CARTPT in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 3 NC_064561.1 (129418959..129421272, complement)

    Chromosome 3 - NC_064561.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125963919 Neighboring gene microtubule associated protein 1B Neighboring gene mpv17-like protein Neighboring gene methylcrotonyl-CoA carboxylase subunit 2 Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene BDP1 general transcription factor IIIB subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064561.1 Chromosome 3 Reference mOrcOrc1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables neuropeptide hormone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in adult feeding behavior IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to starvation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of appetite IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of MAPK cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cocaine- and amphetamine-regulated transcript protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mOrcOrc1.1 Primary Assembly

    Genomic

    1. NC_064561.1 Reference mOrcOrc1.1 Primary Assembly

      Range
      129418959..129421272 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004270792.3 → XP_004270840.1  cocaine- and amphetamine-regulated transcript protein

      Related
      ENSOORP00010005774.1, ENSOORT00010007141.1
      Conserved Domains (1) summary
      pfam06373
      Location:48 → 116
      CART; Cocaine and amphetamine regulated transcript protein (CART)
    Nucleotide Protein
    Heading Accession and Version

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