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    S1PR1 sphingosine-1-phosphate receptor 1 [ Orcinus orca (killer whale) ]

    Gene ID: 101286404, updated on 8-Mar-2024

    Summary

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    Gene symbol
    S1PR1
    Gene description
    sphingosine-1-phosphate receptor 1
    See related
    EnsemblRapid:ENSOORG00010014129
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Orcinus orca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
    Orthologs
    human mouse all
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    Genomic context

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    See S1PR1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 1 NC_064559.1 (123456407..123461464, complement)

    Chromosome 1 - NC_064559.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2-like Neighboring gene uncharacterized LOC125964111 Neighboring gene uncharacterized LOC117202510

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064559.1 Chromosome 1 Reference mOrcOrc1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sphingosine-1-phosphate receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in angiogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sphingosine-1-phosphate receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sphingosine 1-phosphate receptor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mOrcOrc1.1 Primary Assembly

    Genomic

    1. NC_064559.1 Reference mOrcOrc1.1 Primary Assembly

      Range
      123456407..123461464 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004263090.4 → XP_004263138.1  sphingosine 1-phosphate receptor 1

      See identical proteins and their annotated locations for XP_004263138.1

      Related
      ENSOORP00010018260.1, ENSOORT00010020993.1
      Conserved Domains (1) summary
      cd15346
      Location:46 → 322
      7tmA_S1PR1_Edg1; sphingosine-1-phosphate receptor subtype 1 (S1PR1 or S1P1), also called endothelial differentiation gene 1 (Edg1), member of the class A family of seven-transmembrane G protein-coupled receptors

    2. XM_033433938.2 → XP_033289829.1  sphingosine 1-phosphate receptor 1

      Conserved Domains (1) summary
      cd15346
      Location:46 → 322
      7tmA_S1PR1_Edg1; sphingosine-1-phosphate receptor subtype 1 (S1PR1 or S1P1), also called endothelial differentiation gene 1 (Edg1), member of the class A family of seven-transmembrane G protein-coupled receptors

    3. XM_012533691.3 → XP_012389145.1  sphingosine 1-phosphate receptor 1

      See identical proteins and their annotated locations for XP_012389145.1

      Conserved Domains (1) summary
      cd15346
      Location:46 → 322
      7tmA_S1PR1_Edg1; sphingosine-1-phosphate receptor subtype 1 (S1PR1 or S1P1), also called endothelial differentiation gene 1 (Edg1), member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein
    Heading Accession and Version

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