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    LOC101255574 plant intracellular Ras-group-related LRR protein 4 [ Solanum lycopersicum (tomato) ]

    Gene ID: 101255574, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC101255574
    Gene description
    plant intracellular Ras-group-related LRR protein 4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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    Genomic context

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    See LOC101255574 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current SL3.0 (GCF_000188115.4) 2 NC_015439.3 (32454497..32457284)
    102 previous assembly SL2.50 (GCF_000188115.3) Unplaced Scaffold NW_004194387.1 (400380..403193, complement)

    Chromosome 2 - NC_015439.3Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH domain-containing protein 6-like Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene eukaryotic translation initiation factor 6-2 Neighboring gene ubiquitin-like-specific protease 1D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. Aoki K, et al. BMC Genomics, 2010 Mar 30. PMID 20350329, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    plant intracellular Ras-group-related LRR protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SL3.0 Primary Assembly

    Genomic

    1. NC_015439.3 Reference SL3.0 Primary Assembly

      Range
      32454497..32457284
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004253201.4 → XP_004253249.1  plant intracellular Ras-group-related LRR protein 4

      UniProtKB/TrEMBL
      A0A3Q7E879
      Conserved Domains (3) summary
      cd00116
      Location:238 → 482
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:263 → 285
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:261 → 319
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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