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    LOC101245369 uncharacterized LOC101245369 [ Solanum lycopersicum (tomato) ]

    Gene ID: 101245369, updated on 1-Nov-2024

    Summary

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    Gene symbol
    LOC101245369
    Gene description
    uncharacterized LOC101245369
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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    Genomic context

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    See LOC101245369 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_09 current SLM_r2.1 (GCF_036512215.1) 6 NC_090805.1 (42687358..42692020)
    103 previous assembly SL3.0 (GCF_000188115.4) 6 NC_015443.3 (40351038..40355645)

    Chromosome 6 - NC_090805.1Genomic Context describing neighboring genes Neighboring gene bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic Neighboring gene protein PARTING DANCERS homolog Neighboring gene transcription factor bHLH18-like Neighboring gene transcription factor bHLH18-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. Aoki K, et al. BMC Genomics, 2010 Mar 30. PMID 20350329, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC101245369
    Names
    TVP38/TMEM64 family membrane protein slr0305
    transmembrane protein 41B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036512215.1-RS_2024_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SLM_r2.1 Primary Assembly

    Genomic

    1. NC_090805.1 Reference SLM_r2.1 Primary Assembly

      Range
      42687358..42692020
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004241844.5 → XP_004241892.1  uncharacterized protein LOC101245369

      UniProtKB/TrEMBL
      A0A3Q7GW76
      Conserved Domains (2) summary
      COG0398
      Location:109 → 329
      TVP38; Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain [Function unknown]
      COG0586
      Location:139 → 326
      DedA; Uncharacterized membrane protein DedA, SNARE-associated domain [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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