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    LOC101256961 diacylglycerol kinase 1-like [ Solanum lycopersicum (tomato) ]

    Gene ID: 101256961, updated on 1-Nov-2024

    Summary

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    Gene symbol
    LOC101256961
    Gene description
    diacylglycerol kinase 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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    Genomic context

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    See LOC101256961 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_09 current SLM_r2.1 (GCF_036512215.1) 3 NC_090802.1 (61951617..61959526)
    103 previous assembly SL3.0 (GCF_000188115.4) 3 NC_015440.3 (66578435..66586278)

    Chromosome 3 - NC_090802.1Genomic Context describing neighboring genes Neighboring gene expansin-A23-like Neighboring gene small ribosomal subunit protein eS19x Neighboring gene UDP-glucose 6-dehydrogenase 1-like Neighboring gene pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP-dependent diacylglycerol kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    diacylglycerol kinase 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036512215.1-RS_2024_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SLM_r2.1 Primary Assembly

    Genomic

    1. NC_090802.1 Reference SLM_r2.1 Primary Assembly

      Range
      61951617..61959526
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004235926.5 → XP_004235974.1  diacylglycerol kinase 1-like isoform X1

      UniProtKB/TrEMBL
      A0A3Q7GGR1
      Conserved Domains (4) summary
      smart00046
      Location:365 → 491
      DAGKc; Diacylglycerol kinase catalytic domain (presumed)
      pfam00130
      Location:153 → 211
      C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
      pfam00609
      Location:509 → 666
      DAGK_acc; Diacylglycerol kinase accessory domain
      cl00040
      Location:80 → 140
      C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...

    2. XM_010320541.4 → XP_010318843.1  diacylglycerol kinase 1-like isoform X2

      See identical proteins and their annotated locations for XP_010318843.1

      Conserved Domains (4) summary
      smart00046
      Location:307 → 433
      DAGKc; Diacylglycerol kinase catalytic domain (presumed)
      pfam00130
      Location:95 → 153
      C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
      cl00040
      Location:22 → 82
      C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
      pfam00609
      Location:451 → 608
      DAGK_acc; Diacylglycerol kinase accessory domain

    3. XM_010320540.4 → XP_010318842.1  diacylglycerol kinase 1-like isoform X2

      See identical proteins and their annotated locations for XP_010318842.1

      Conserved Domains (4) summary
      smart00046
      Location:307 → 433
      DAGKc; Diacylglycerol kinase catalytic domain (presumed)
      pfam00130
      Location:95 → 153
      C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
      cl00040
      Location:22 → 82
      C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
      pfam00609
      Location:451 → 608
      DAGK_acc; Diacylglycerol kinase accessory domain

    4. XM_026030109.2 → XP_025885894.1  diacylglycerol kinase 1-like isoform X2

      Conserved Domains (4) summary
      smart00046
      Location:307 → 433
      DAGKc; Diacylglycerol kinase catalytic domain (presumed)
      pfam00130
      Location:95 → 153
      C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
      cl00040
      Location:22 → 82
      C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
      pfam00609
      Location:451 → 608
      DAGK_acc; Diacylglycerol kinase accessory domain
    Nucleotide Protein
    Heading Accession and Version

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