U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC101205934 LRR receptor-like serine/threonine-protein kinase [ Cucumis sativus (cucumber) ]

    Gene ID: 101205934, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC101205934
    Gene description
    LRR receptor-like serine/threonine-protein kinase
    Locus tag
    Csa_013992
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC101205934 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 1 NC_026655.2 (5443150..5446682, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 1 NC_026655.1 (5424389..5428370, complement)

    Chromosome 1 - NC_026655.2Genomic Context describing neighboring genes Neighboring gene plant UBX domain-containing protein 10 Neighboring gene uncharacterized LOC101205708 Neighboring gene uncharacterized LOC116404630 Neighboring gene galactinol--sucrose galactosyltransferase

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    LRR receptor-like serine/threonine-protein kinase
    Names
    probable LRR receptor-like serine/threonine-protein kinase At4g26540

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026655.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      5443150..5446682 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004152440.3 → XP_004152488.1  LRR receptor-like serine/threonine-protein kinase

      See identical proteins and their annotated locations for XP_004152488.1

      UniProtKB/TrEMBL
      A0A0A0LQY8
      Conserved Domains (2) summary
      PLN00113
      Location:2 → 1059
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:335 → 358
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases