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    LOC101208665 AP2-like ethylene-responsive transcription factor TOE3 [ Cucumis sativus (cucumber) ]

    Gene ID: 101208665, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101208665
    Gene description
    AP2-like ethylene-responsive transcription factor TOE3
    Locus tag
    Csa_006802
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101208665 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 2 NC_026656.2 (13663988..13668063)
    101 previous assembly ASM407v2 (GCF_000004075.2) 2 NC_026656.1 (13388178..13392121, complement)

    Chromosome 2 - NC_026656.2Genomic Context describing neighboring genes Neighboring gene prostamide/prostaglandin F synthase Neighboring gene ethylene-responsive transcription factor ERF011 Neighboring gene U3 small nucleolar RNA-associated protein 18 homolog Neighboring gene filament-like plant protein 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AP2-like ethylene-responsive transcription factor TOE3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026656.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      13663988..13668063
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011651033.2 → XP_011649335.1  AP2-like ethylene-responsive transcription factor TOE3

      See identical proteins and their annotated locations for XP_011649335.1

      UniProtKB/TrEMBL
      A0A0A0LJP0
      Conserved Domains (1) summary
      smart00380
      Location:234 → 296
      AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs

    2. XM_004149638.3 → XP_004149686.1  AP2-like ethylene-responsive transcription factor TOE3

      See identical proteins and their annotated locations for XP_004149686.1

      UniProtKB/TrEMBL
      A0A0A0LJP0
      Conserved Domains (1) summary
      smart00380
      Location:234 → 296
      AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
    Nucleotide Protein
    Heading Accession and Version

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