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    LOC101219881 probable ubiquitin-conjugating enzyme E2 25 [ Cucumis sativus (cucumber) ]

    Gene ID: 101219881, updated on 14-Dec-2023

    Summary

    Gene symbol
    LOC101219881
    Gene description
    probable ubiquitin-conjugating enzyme E2 25
    Locus tag
    Csa_012313
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

    See LOC101219881 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 4 NC_026658.2 (23910583..23915945)
    101 previous assembly ASM407v2 (GCF_000004075.2) 4 NC_026658.1 (20780025..20785463)

    Chromosome 4 - NC_026658.2Genomic Context describing neighboring genes Neighboring gene protein SPA1-RELATED 3 Neighboring gene uncharacterized LOC101219639 Neighboring gene translation initiation factor IF-1, chloroplastic Neighboring gene RING-H2 finger protein ATL39-like

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    probable ubiquitin-conjugating enzyme E2 25

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026658.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      23910583..23915945
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011655772.2XP_011654074.1  probable ubiquitin-conjugating enzyme E2 25 isoform X1

      Conserved Domains (1) summary
      cd00195
      Location:423550
      UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...
    2. XM_004141315.3XP_004141363.1  probable ubiquitin-conjugating enzyme E2 25 isoform X2

      See identical proteins and their annotated locations for XP_004141363.1

      UniProtKB/TrEMBL
      A0A0A0KZM7
      Conserved Domains (1) summary
      cd00195
      Location:380507
      UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...