U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    AMM49_RS05125 helix-turn-helix transcriptional regulator [ Streptococcus agalactiae ]

    Gene ID: 66885902, updated on 3-Apr-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    AMM49_RS05125
    Gene description
    helix-turn-helix transcriptional regulator
    Locus tag
    AMM49_RS05125
    Gene type
    protein coding
    Organism
    Streptococcus agalactiae (strain: NGBS128, nat-host: Homo sapiens)
    Lineage
    Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus
    Old locus tag
    AMM49_05115
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help

    NZ_CP012480.1Genomic Context describing neighboring genes Neighboring gene tetracycline resistance ribosomal protection protein Tet(M) Neighboring gene cysteine-rich KTR domain-containing protein Neighboring gene sigma-70 family RNA polymerase sigma factor Neighboring gene helix-turn-helix domain-containing protein Neighboring gene DUF3173 domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_CP012480.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. 2015 Epidemic of Severe Streptococcus agalactiae Sequence Type 283 Infections in Singapore Associated With the Consumption of Raw Freshwater Fish: A Detailed Analysis of Clinical, Epidemiological, and Bacterial Sequencing Data. Kalimuddin S, et al. Clin Infect Dis, 2017 May 15. PMID 28475781

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    helix-turn-helix transcriptional regulator

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP012480.1 Reference assembly

      Range
      998291..998644 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_001227349.1 MULTISPECIES: helix-turn-helix transcriptional regulator [Bacilli]

      See identical proteins and their annotated locations for WP_001227349.1

      UniProtKB/TrEMBL
      A0A059VA48, A0A1U7E9I7, A0A2N8Q0P0, A0A3D8YKG4, A0A475BBN2, A0A4Y6HSE7, A0A6G7WJK5, A0A6N3E4Y8, A0A7V9WS76, A0A7X9C4M5, A0A7Z8CYE1, N1JV78
      Conserved Domains (2) summary
      cd00093
      Location:14 → 71
      HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
      pfam18430
      Location:80 → 114
      DBD_HTH; Putative DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version