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    SOD1 superoxide dismutase 1 [ Sapajus apella (tufted capuchin) ]

    Gene ID: 116550891, updated on 18-Mar-2024

    Summary

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    Gene symbol
    SOD1
    Gene description
    superoxide dismutase 1
    See related
    EnsemblRapid:ENSSAEG00000002439
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sapajus apella
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Cebinae; Sapajus
    Orthologs
    human mouse all
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    Genomic context

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    See SOD1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current GSC_monkey_1.0 (GCF_009761245.1) Unplaced Scaffold NW_022436948.1 (14070274..14079731, complement)

    NW_022436948.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116550889 Neighboring gene SR-related CTD associated factor 4 Neighboring gene small nucleolar RNA SNORA81 Neighboring gene 39S ribosomal protein L42, mitochondrial pseudogene Neighboring gene chromatin modification-related protein MEAF6 pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022436948 Unplaced Scaffold Reference GSC_monkey_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure, molecular evolution, and gene expression of primate superoxide dismutases. Fukuhara R, et al. Gene, 2002 Aug 21. PMID 12383507
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables superoxide dismutase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in removal of superoxide radicals IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    superoxide dismutase [Cu-Zn]
    Names
    Cu,Zn-superoxide dismutase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sapajus apella Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GSC_monkey_1.0

    Genomic

    1. NW_022436948.1 Reference GSC_monkey_1.0

      Range
      14070274..14079731 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032277048.1 → XP_032132939.1  superoxide dismutase [Cu-Zn]

      UniProtKB/TrEMBL
      A0A6J3HTF9
      Related
      ENSSAEP00000002482.1, ENSSAET00000003400.1
      Conserved Domains (1) summary
      cd00305
      Location:3 → 147
      Cu-Zn_Superoxide_Dismutase; Copper/zinc superoxide dismutase (SOD). superoxide dismutases catalyse the conversion of superoxide radicals to molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8HXP9.3 GenPept UniProtKB/Swiss-Prot:Q8HXP9

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