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    TPHA0C01280 hypothetical protein [ Tetrapisispora phaffii CBS 4417 ]

    Gene ID: 11533986, updated on 22-Oct-2023

    Summary

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    Gene symbol
    TPHA0C01280
    Gene description
    hypothetical protein
    Locus tag
    TPHA_0C01280
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Tetrapisispora phaffii CBS 4417 (strain: type strain:CBS 4417)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
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    Genomic context

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    See TPHA0C01280 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_016522.1 (291235..293799)

    Chromosome 3 - NC_016522.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_016522.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein
    XP_003684718.1
    • similar to Saccharomyces cerevisiae SAP1 (YER047C); ancestral locus Anc_7.215

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_016522.1 Reference assembly

      Range
      291235..293799
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003684670.1 → XP_003684718.1  hypothetical protein TPHA_0C01280 [Tetrapisispora phaffii CBS 4417]

      See identical proteins and their annotated locations for XP_003684718.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      G8BRA8
      Conserved Domains (4) summary
      COG0464
      Location:352 → 841
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
      pfam00004
      Location:608 → 747
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam09336
      Location:807 → 850
      Vps4_C; Vps4 C terminal oligomerization domain
      cl21455
      Location:571 → 627
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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