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    NF-YA19 nuclear transcription factor Y subunit A-19 [ Glycine max (soybean) ]

    Gene ID: 100777544, updated on 7-Dec-2023

    Summary

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    Gene symbol
    NF-YA19
    Gene description
    nuclear transcription factor Y subunit A-19
    Locus tag
    GLYMA_17G051400v4
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
    Also known as
    GmNF-YA19
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    Genomic context

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    See NF-YA19 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 17 NC_038253.2 (3907624..3912541)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 17 NC_038253.1 (3904403..3909347)

    Chromosome 17 - NC_038253.2Genomic Context describing neighboring genes Neighboring gene protein Brevis radix-like 4 Neighboring gene phospholipid:diacylglycerol acyltransferase 1 Neighboring gene alpha/beta hydrolase domain-containing protein WAV2 Neighboring gene PHD2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide expression analysis of soybean NF-Y genes reveals potential function in development and drought response. Quach TN, et al. Mol Genet Genomics, 2015 Jun. PMID 25542200, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CCAAT-binding factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear transcription factor Y subunit A-19
    Names
    nuclear transcription factor Y subunit A-8-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001253093.3 → NP_001240022.1  nuclear transcription factor Y subunit A-19

      See identical proteins and their annotated locations for NP_001240022.1

      Status: VALIDATED

      Source sequence(s)
      ACUP04005898, BT096576
      UniProtKB/TrEMBL
      A0A0R0F7S6, C6TG32
      Conserved Domains (1) summary
      smart00521
      Location:71 → 132
      CBF; CCAAT-Binding transcription Factor

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038253.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      3907624..3912541
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006600097.4 → XP_006600160.1  nuclear transcription factor Y subunit A-19 isoform X1

      See identical proteins and their annotated locations for XP_006600160.1

      UniProtKB/TrEMBL
      A0A0R0F7S6, C6TG32
      Conserved Domains (1) summary
      smart00521
      Location:71 → 132
      CBF; CCAAT-Binding transcription Factor
    Nucleotide Protein
    Heading Accession and Version

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