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    LOC11419946 F-box/LRR-repeat protein At3g58930 [ Medicago truncatula (barrel medic) ]

    Gene ID: 11419946, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC11419946
    Gene description
    F-box/LRR-repeat protein At3g58930
    Locus tag
    MtrunA17_Chr4g0011351
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    See LOC11419946 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 4 NC_053045.1 (8888438..8889396, complement)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 4 NC_016410.2 (8368132..8369746, complement)

    Chromosome 4 - NC_053045.1Genomic Context describing neighboring genes Neighboring gene F-box/FBD/LRR-repeat protein At5g53840-like Neighboring gene F-box/FBD/LRR-repeat protein At4g26340 Neighboring gene uncharacterized LOC25491607 Neighboring gene F-box/FBD/LRR-repeat protein At4g26340

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box/LRR-repeat protein At3g58930
    Names
    F-box/RNI/FBD-like domain protein
    putative F-box domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053045.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      8888438..8889396 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003605101.3 → XP_003605149.1  F-box/LRR-repeat protein At3g58930

      See identical proteins and their annotated locations for XP_003605149.1

      UniProtKB/TrEMBL
      G7JEP4, Q2HS92
      Conserved Domains (1) summary
      pfam00646
      Location:17 → 58
      F-box; F-box domain
    Nucleotide Protein
    Heading Accession and Version

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