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    LOC11407481 cytochrome b561 and DOMON domain-containing protein At5g47530 [ Medicago truncatula (barrel medic) ]

    Gene ID: 11407481, updated on 18-Aug-2023

    Summary

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    Gene symbol
    LOC11407481
    Gene description
    cytochrome b561 and DOMON domain-containing protein At5g47530
    Locus tag
    MtrunA17_Chr2g0290131
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 2 NC_053043.1 (9465982..9468460, complement)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 2 NC_016408.2 (9411680..9414176, complement)

    Chromosome 2 - NC_053043.1Genomic Context describing neighboring genes Neighboring gene putative MO25-like protein At5g47540 Neighboring gene inositol-phosphate phosphatase Neighboring gene U-box domain-containing protein 4 Neighboring gene inositol transporter 4-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    cytochrome b561 and DOMON domain-containing protein At5g47530
    Names
    auxin-responsive family protein
    putative cytochrome b561 and DOMON domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053043.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      9465982..9468460 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003594197.4 → XP_003594245.1  cytochrome b561 and DOMON domain-containing protein At5g47530

      See identical proteins and their annotated locations for XP_003594245.1

      UniProtKB/TrEMBL
      G7IP86, I3SWW4
      Conserved Domains (2) summary
      cd08760
      Location:184 → 371
      Cyt_b561_FRRS1_like; Eukaryotic cytochrome b(561), including the FRRS1 gene product
      cd09629
      Location:40 → 194
      DOMON_CIL1_like; DOMON-like domain of Brassica carinata CIL1 and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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