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    LOC100806071 65-kDa microtubule-associated protein 1 [ Glycine max (soybean) ]

    Gene ID: 100806071, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100806071
    Gene description
    65-kDa microtubule-associated protein 1
    Locus tag
    GLYMA_02G295100v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100806071 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 2 NC_016089.4 (49143494..49147752)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 2 NC_016089.3 (47319350..47323640)

    Chromosome 2 - NC_016089.4Genomic Context describing neighboring genes Neighboring gene trigger factor-like protein TIG, Chloroplastic Neighboring gene phosphatidate cytidylyltransferase 1 Neighboring gene protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 Neighboring gene indole-3-acetate O-methyltransferase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytokinesis by cell plate formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in spindle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    65-kDa microtubule-associated protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_016089.4 Reference Glycine_max_v4.0 Primary Assembly

      Range
      49143494..49147752
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006575629.3 → XP_006575692.1  65-kDa microtubule-associated protein 1 isoform X1

      UniProtKB/TrEMBL
      K7M4F5
      Conserved Domains (1) summary
      pfam03999
      Location:56 → 608
      MAP65_ASE1; Microtubule associated protein (MAP65/ASE1 family)

    2. XM_003519550.4 → XP_003519598.1  65-kDa microtubule-associated protein 1 isoform X2

      See identical proteins and their annotated locations for XP_003519598.1

      UniProtKB/TrEMBL
      A0A0R4J2T3, K7M4F5
      Conserved Domains (1) summary
      pfam03999
      Location:56 → 581
      MAP65_ASE1; Microtubule associated protein (MAP65/ASE1 family)
    Nucleotide Protein
    Heading Accession and Version

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