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    LOC100499837 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ Glycine max (soybean) ]

    Gene ID: 100499837, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100499837
    Gene description
    NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic
    Locus tag
    GLYMA_13G068600v4
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
    Annotation information
    Annotation category: suggests misassembly
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC100499837 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (15917262..15917924, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (16858725..16859387, complement)

    Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene cytochrome P450 82A4-like Neighboring gene uncharacterized LOC106795487 Neighboring gene cytochrome P450 82A3-like Neighboring gene senescence-associated carboxylesterase 101

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NADH dehydrogenase (ubiquinone) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of NADH dehydrogenase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in chloroplast IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001249765.2 → NP_001236694.1  NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic

      See identical proteins and their annotated locations for NP_001236694.1

      Status: PROVISIONAL

      Source sequence(s)
      BT089788
      UniProtKB/TrEMBL
      C6SX94
      Conserved Domains (1) summary
      CHL00022
      Location:1 → 120
      ndhC; NADH dehydrogenase subunit 3

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      15917262..15917924 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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