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    Napg NSF attachment protein gamma [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100718181, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Napg
    Gene description
    NSF attachment protein gamma
    See related
    Ensembl:ENSCPOG00000005678
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Napg in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947503.1 (67103577..67123386)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176337.1 (1698743..1718523, complement)

    NW_026947503.1Genomic Context describing neighboring genes Neighboring gene ADAM 6 protein precursor Neighboring gene uncharacterized LOC106026392 Neighboring gene APC down-regulated 1 Neighboring gene piezo type mechanosensitive ion channel component 2 Neighboring gene G protein subunit alpha L Neighboring gene charged multivesicular body protein 1B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables soluble NSF attachment protein activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in vacuolar membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gamma-soluble NSF attachment protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947503.1 Reference mCavPor4.1

      Range
      67103577..67123386
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003464451.5 → XP_003464499.1  gamma-soluble NSF attachment protein isoform X1

      UniProtKB/TrEMBL
      A0A286XQ02, H0V615
      Related
      ENSCPOP00000027345.1
      Conserved Domains (1) summary
      cd15832
      Location:8 → 278
      SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family

    2. XM_063231988.1 → XP_063088058.1  gamma-soluble NSF attachment protein isoform X2

    Nucleotide Protein
    Heading Accession and Version

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