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    UBXN2B UBX domain protein 2B [ Canis lupus familiaris (dog) ]

    Gene ID: 477891, updated on 17-Aug-2024

    Summary

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    Official Symbol
    UBXN2Bprovided by VGNC
    Official Full Name
    UBX domain protein 2Bprovided by VGNC
    Primary source
    VGNC:VGNC:48099
    See related
    Ensembl:ENSCAFG00845027636
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See UBXN2B in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 29 NC_051833.1 (9314507..9343660)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 29 NC_006611.4 (9541980..9571171)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 29 NC_049250.1 (9717333..9746587)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 29 NC_049289.1 (9312339..9341685)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 29 NC_049770.1 (9438305..9467577)

    Chromosome 29 - NC_051833.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111093245 Neighboring gene uncharacterized LOC119866668 Neighboring gene ATP synthase subunit g, mitochondrial-like Neighboring gene cytochrome P450 family 7 subfamily A member 1 Neighboring gene syndecan binding protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in membrane fusion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nuclear membrane reassembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UBX domain-containing protein 2B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051833.1 Reference ROS_Cfam_1.0

      Range
      9314507..9343660
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038441219.1 → XP_038297147.1  UBX domain-containing protein 2B

      UniProtKB/TrEMBL
      A0A8C0KRP6, A0A8C0NM50, A0A8I3S6E1, A0A8P0TRX6
      Related
      ENSCAFP00845038237.1, ENSCAFT00845048735.1
      Conserved Domains (2) summary
      smart00553
      Location:139 → 231
      SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
      cd17161
      Location:249 → 330
      UBX_UBXN2B; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2B (UBXN2B) and similar proteins

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049289.1 Alternate UMICH_Zoey_3.1

      Range
      9312339..9341685
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038515795.1 → XP_038371723.1  UBX domain-containing protein 2B

      Conserved Domains (2) summary
      smart00553
      Location:139 → 231
      SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
      cd17161
      Location:249 → 330
      UBX_UBXN2B; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2B (UBXN2B) and similar proteins

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049770.1 Alternate UNSW_CanFamBas_1.0

      Range
      9438305..9467577
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038643606.1 → XP_038499534.1  UBX domain-containing protein 2B

      Conserved Domains (2) summary
      smart00553
      Location:139 → 231
      SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
      cd17161
      Location:249 → 330
      UBX_UBXN2B; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2B (UBXN2B) and similar proteins

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049250.1 Alternate UU_Cfam_GSD_1.0

      Range
      9717333..9746587
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038579364.1 → XP_038435292.1  UBX domain-containing protein 2B

      UniProtKB/TrEMBL
      A0A8C0KRP6, A0A8C0NM50, A0A8I3S6E1, A0A8P0TRX6
      Conserved Domains (2) summary
      smart00553
      Location:139 → 231
      SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
      cd17161
      Location:249 → 330
      UBX_UBXN2B; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2B (UBXN2B) and similar proteins

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006611.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      9541980..9571171
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_535083.7 → XP_535083.3  UBX domain-containing protein 2B

      UniProtKB/TrEMBL
      A0A8C0KRP6, A0A8C0NM50, A0A8I3S6E1, A0A8P0TRX6
      Conserved Domains (2) summary
      smart00553
      Location:139 → 231
      SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
      cd17161
      Location:249 → 330
      UBX_UBXN2B; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2B (UBXN2B) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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