U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    thiI tRNA uracil 4-sulfurtransferase ThiI [ Ligilactobacillus ruminis ATCC 27782 ]

    Gene ID: 29802940, updated on 6-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    thiI
    Gene description
    tRNA uracil 4-sulfurtransferase ThiI
    Locus tag
    LRC_RS06870
    Gene type
    protein coding
    Organism
    Ligilactobacillus ruminis ATCC 27782 (strain: ATCC 27782, culture-collection: ATCC:27782)
    Lineage
    Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Ligilactobacillus
    Old locus tag
    LRC_13220
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_015975.1 (1380297..1381514, complement)

    NC_015975.1Genomic Context describing neighboring genes Neighboring gene type ISP restriction/modification enzyme Neighboring gene DEAD/DEAH box helicase family protein Neighboring gene valine--tRNA ligase Neighboring gene cysteine desulfurase family protein Neighboring gene septation ring formation regulator EzrA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_015975.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Direct evidence that ThiI is an ATP pyrophosphatase for the adenylation of uridine in 4-thiouridine biosynthesis. You D, et al. Chembiochem, 2008 Aug 11. PMID 18604845
    2. The role of the cysteine residues of ThiI in the generation of 4-thiouridine in tRNA. Mueller EG, et al. J Biol Chem, 2001 Sep 7. PMID 11443125
    3. Characterization of thiI, a new gene involved in thiazole biosynthesis in Salmonella typhimurium. Webb E, et al. J Bacteriol, 1997 Jul. PMID 9209060, Free PMC Article
    4. The rhodanese domain of ThiI is both necessary and sufficient for synthesis of the thiazole moiety of thiamine in Salmonella enterica. Martinez-Gomez NC, et al. J Bacteriol, 2011 Sep. PMID 21724998, Free PMC Article
    5. Genome sequences and comparative genomics of two Lactobacillus ruminis strains from the bovine and human intestinal tracts. Forde BM, et al. Microb Cell Fact, 2011 Aug 30. PMID 21995554, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    tRNA uracil 4-sulfurtransferase ThiI
    WP_014073744.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_015975.1 Reference assembly

      Range
      1380297..1381514 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_014073744.1 tRNA uracil 4-sulfurtransferase ThiI [Ligilactobacillus ruminis]

      See identical proteins and their annotated locations for WP_014073744.1

      UniProtKB/TrEMBL
      A0A1I2QDK4, A0A837DVE1, A0A837ITJ6, G2SQ49
      Conserved Domains (3) summary
      cd11716
      Location:6 → 170
      THUMP_ThiI; THUMP domain of thiamine biosynthesis protein ThiI
      PRK01565
      Location:2 → 387
      PRK01565; thiamine biosynthesis protein ThiI; Provisional
      cd01712
      Location:179 → 355
      ThiI; ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway. It belongs to the Adenosine Nucleotide Hydrolysis suoerfamily and predicted to bind to Adenosine nucleotide.
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases