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    ycf1 ycf1 [ Amborella trichopoda ]

    Gene ID: 2546536, updated on 26-Mar-2020

    Summary

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    Gene symbol
    ycf1
    Gene description
    ycf1
    Locus tag
    AmtrCp086
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Amborella trichopoda
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; basal Magnoliophyta; Amborellales; Amborellaceae; Amborella
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    Genomic context

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    See ycf1 in Genome Data Viewer
    Annotation release Status Assembly Chr Location
    101 current AMTR1.0 (GCF_000471905.2) Chloroplast (non-nuclear) NC_005086.1 (132129..137618, complement)

    NC_005086.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase 49 kDa subunit Neighboring gene ribosomal protein S15 Neighboring gene tRNA-Asn Neighboring gene tRNA-Arg

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_005086.1 Chromosome Chloroplast Reference AMTR1.0 non-nuclear

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Amborella trichopoda chloroplast genome sequence suggests that amborella is not a basal angiosperm. Goremykin VV, et al. Mol Biol Evol, 2003 Sep. PMID 12832641

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ycf1
    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_005086.1 Reference assembly

      Range
      132129..137618 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_904157.1 hypothetical protein AmtrCp086 [Amborella trichopoda]

      See identical proteins and their annotated locations for NP_904157.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q70XV6
      Conserved Domains (2) summary
      CHL00204
      Location:43 → 1829
      ycf1; Ycf1; Provisional
      pfam05758
      Location:57 → 901
      Ycf1; Ycf1
    Nucleotide Protein
    Heading Accession and Version

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