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    CTHT_0003450 zinc finger domain-containing protein [ Chaetomium thermophilum var. thermophilum DSM 1495 ]

    Gene ID: 18254383, updated on 21-Dec-2023

    Summary

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    Gene symbol
    CTHT_0003450
    Gene description
    zinc finger domain-containing protein
    Locus tag
    CTHT_0003450
    Gene type
    protein coding
    RNA name
    zinc finger domain-containing protein
    RefSeq status
    PROVISIONAL
    Organism
    Chaetomium thermophilum var. thermophilum DSM 1495 (strain: DSM 1495, variety: thermophilum, culture-collection: DSM:1495, type-material: type material of Chaetomium thermophilum)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Chaetomium
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    Genomic context

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    See CTHT_0003450 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_006383023.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene arp2/3 complex 34 kda subunit-like protein Neighboring gene putative transcription initiation factor Neighboring gene nuclease-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006383023.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile. Amlacher S, et al. Cell, 2011 Jul 22. PMID 21784248

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger domain-containing protein
    XP_006690891.1
    • SMART: ZnF_C3H1 zinc finger

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_006383023.1 Reference assembly

      Range
      1124773..1126382 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006690828.1 → XP_006690891.1  zinc finger domain-containing protein [Chaetomium thermophilum var. thermophilum DSM 1495]

      See identical proteins and their annotated locations for XP_006690891.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      G0RZM1
      Conserved Domains (2) summary
      pfam00642
      Location:249 → 272
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      pfam13914
      Location:37 → 104
      Phostensin; Phostensin PP1-binding and SH3-binding region
    Nucleotide Protein
    Heading Accession and Version

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