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    Tsp_11995 histone H3, embryonic [ Trichinella spiralis ]

    Gene ID: 10902988, updated on 28-Dec-2023

    Summary

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    Gene symbol
    Tsp_11995
    Gene description
    histone H3, embryonic
    Locus tag
    Tsp_11995
    Gene type
    protein coding
    RNA name
    histone H3, embryonic
    RefSeq status
    PROVISIONAL
    Organism
    Trichinella spiralis (strain: ISS 195)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    7

    NW_003526940.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene histone H3, embryonic Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003526940.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nucleosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    histone H3, embryonic
    XP_003382340.1
    • 5' end; 3' end is gene Tsp_11995 on contig Tsp_Contig41.7

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003526940.1 Reference assembly

      Range
      3396655..3404543
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003382292.1 → XP_003382340.1  histone H3, embryonic [Trichinella spiralis]

      See identical proteins and their annotated locations for XP_003382340.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q967I1
      Conserved Domains (2) summary
      PTZ00018
      Location:1 → 132
      PTZ00018; histone H3; Provisional
      pfam00125
      Location:1 → 132
      Histone; Core histone H2A/H2B/H3/H4
    Nucleotide Protein
    Heading Accession and Version

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