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    LOC123398932 actin-3-like [ Hordeum vulgare subsp. vulgare (domesticated barley) ]

    Gene ID: 123398932, updated on 18-Aug-2023

    Summary

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    Gene symbol
    LOC123398932
    Gene description
    actin-3-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hordeum vulgare subsp. vulgare (sub-species: vulgare)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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    Genomic context

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    See LOC123398932 in Genome Data Viewer
    Location:
    chromosome: 5H
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current MorexV3_pseudomolecules_assembly (GCF_904849725.1) 5H NC_058522.1 (263268481..263270884, complement)

    Chromosome 5H - NC_058522.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123397815 Neighboring gene DNA replication complex GINS protein PSF2-like Neighboring gene transcription factor VIP1-like Neighboring gene uncharacterized LOC123395319

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_058522.1 Chromosome 5H Reference MorexV3_pseudomolecules_assembly Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence analysis and gene identification in a set of mapped RFLP markers in barley (Hordeum vulgare). Michalek W, et al. Genome, 1999 Oct. PMID 10584307
    2. Comprehensive sequence analysis of 24,783 barley full-length cDNAs derived from 12 clone libraries. Matsumoto T, et al. Plant Physiol, 2011 May. PMID 21415278, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    actin-3-like
    Names
    predicted protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Hordeum vulgare subsp. vulgare Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MorexV3_pseudomolecules_assembly Primary Assembly

    Genomic

    1. NC_058522.1 Reference MorexV3_pseudomolecules_assembly Primary Assembly

      Range
      263268481..263270884 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045093373.1 → XP_044949308.1  actin-3-like

      UniProtKB/TrEMBL
      F2DE91, F2DR86, F2E0T8
      Conserved Domains (1) summary
      cl17037
      Location:5 → 377
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
    Nucleotide Protein
    Heading Accession and Version

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