U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC123420042 flavonoid O-methyltransferase-like protein Os11g0303600 [ Hordeum vulgare subsp. vulgare (domesticated barley) ]

    Gene ID: 123420042, updated on 25-Apr-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC123420042
    Gene description
    flavonoid O-methyltransferase-like protein Os11g0303600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hordeum vulgare subsp. vulgare (sub-species: vulgare)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC123420042 in Genome Data Viewer
    Location:
    chromosome: 1H
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current MorexV3_pseudomolecules_assembly (GCF_904849725.1) 1H NC_058518.1 (503713487..503714960, complement)

    Chromosome 1H - NC_058518.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene U2 spliceosomal RNA Neighboring gene chalcone synthase 2 Neighboring gene uncharacterized LOC123402359

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_058518.1 Chromosome 1H Reference MorexV3_pseudomolecules_assembly Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A flavonoid 7-O-methyltransferase is expressed in barley leaves in response to pathogen attack. Christensen AB, et al. Plant Mol Biol, 1998 Jan. PMID 9484434
    2. A putative O-methyltransferase from barley is induced by fungal pathogens and UV light. Gregersen L, et al. Plant Mol Biol, 1994 Dec. PMID 7858218
    3. Comprehensive sequence analysis of 24,783 barley full-length cDNAs derived from 12 clone libraries. Matsumoto T, et al. Plant Physiol, 2011 May. PMID 21415278, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables O-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables S-adenosylmethionine-dependent methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    flavonoid O-methyltransferase-like protein Os11g0303600
    Names
    flavonoid 7-O-methyltransferase
    predicted protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Hordeum vulgare subsp. vulgare Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MorexV3_pseudomolecules_assembly Primary Assembly

    Genomic

    1. NC_058518.1 Reference MorexV3_pseudomolecules_assembly Primary Assembly

      Range
      503713487..503714960 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045107258.1 → XP_044963193.1  flavonoid O-methyltransferase-like protein Os11g0303600

      UniProtKB/TrEMBL
      A0A8I6WY83, F2DM90
      Conserved Domains (1) summary
      TIGR02716
      Location:204 → 317
      C20_methyl_CrtF; C-20 methyltransferase BchU
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases