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    PTSG_13144 hypothetical protein [ Salpingoeca rosetta ]

    Gene ID: 16068579, updated on 14-Dec-2023

    Summary

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    Gene symbol
    PTSG_13144
    Gene description
    hypothetical protein
    Locus tag
    PTSG_13144
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    PROVISIONAL
    Organism
    Salpingoeca rosetta (strain: ATCC 50818, culture-collection: ATCC:50818)
    Lineage
    Eukaryota; Choanoflagellida; Craspedida; Salpingoecidae; Salpingoeca
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    Genomic context

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    See PTSG_13144 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    26

    NW_004754895.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene serine/threonine protein kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004754895.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ribosomal large subunit binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in rescue of stalled ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosome-associated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RQC complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_004754895.1 Reference assembly

      Range
      419043..426993 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004987997.1 → XP_004988054.1  uncharacterized protein PTSG_13144 [Salpingoeca rosetta]

      See identical proteins and their annotated locations for XP_004988054.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      F2US85
      Conserved Domains (3) summary
      COG1293
      Location:112 → 468
      YloA; Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains [Translation, ribosomal structure and biogenesis]
      pfam05670
      Location:348 → 426
      DUF814; Domain of unknown function (DUF814)
      pfam11923
      Location:823 → 921
      DUF3441; Domain of unknown function (DUF3441)
    Protein Accession Links
    GenPept Link UniProtKB Link
    EGD80490.1

    Gene LinkOut

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    Molecular Biology Databases