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    AURANDRAFT_64670 hypothetical protein [ Aureococcus anophagefferens ]

    Gene ID: 20224946, updated on 28-Dec-2023

    Summary

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    Gene symbol
    AURANDRAFT_64670
    Gene description
    hypothetical protein
    Locus tag
    AURANDRAFT_64670
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Aureococcus anophagefferens (strain: CCMP1984)
    Lineage
    Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_008705571.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008705571.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics. Gobler CJ, et al. Proc Natl Acad Sci U S A, 2011 Mar 15. PMID 21368207, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables poly-pyrimidine tract binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pre-mRNA 3'-splice site binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U2-type prespliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U2AF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of commitment complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear speck IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein
    XP_009037574.1
    • putative U2 snRNP auxiliary factor; expressed

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_008705571.1 Reference assembly

      Range
      579549..580193
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009039326.1 → XP_009037574.1  hypothetical protein AURANDRAFT_64670 [Aureococcus anophagefferens]

      See identical proteins and their annotated locations for XP_009037574.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      F0YB65
      Conserved Domains (1) summary
      cd12230
      Location:54 → 135
      RRM1_U2AF65; RNA recognition motif 1 found in U2 large nuclear ribonucleoprotein auxiliary factor U2AF 65 kDa subunit (U2AF65) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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