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    VDBG_07593 transcription initiation factor TFIID complex 60 kDa subunit [ Verticillium alfalfae VaMs.102 ]

    Gene ID: 9537527, updated on 21-Dec-2023

    Summary

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    Gene symbol
    VDBG_07593
    Gene description
    transcription initiation factor TFIID complex 60 kDa subunit
    Locus tag
    VDBG_07593
    Gene type
    protein coding
    RNA name
    transcription initiation factor TFIID complex 60 kDa subunit
    RefSeq status
    PROVISIONAL
    Organism
    Verticillium alfalfae VaMs.102 (strain: VaMs.102)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Plectosphaerellaceae; Verticillium
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    Genomic context

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    See VDBG_07593 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_003315029.1Genomic Context describing neighboring genes Neighboring gene alpha-ketoglutarate-dependent sulfonate dioxygenase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003315029.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II general transcription initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA polymerase II preinitiation complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SAGA complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of SLIK (SAGA-like) complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription factor TFIID complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    transcription initiation factor TFIID complex 60 kDa subunit

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003315029.1 Reference assembly

      Range
      503479..505240 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003002088.1 → XP_003002134.1  transcription initiation factor TFIID complex 60 kDa subunit [Verticillium alfalfae VaMs.102]

      See identical proteins and their annotated locations for XP_003002134.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C9SRR8
      Conserved Domains (1) summary
      cd08050
      Location:88 → 339
      TAF6; TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
    Nucleotide Protein
    Heading Accession and Version

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