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    PITG_16659 DNA-directed RNA polymerase I and III subunit RPAC1, putative [ Phytophthora infestans T30-4 ]

    Gene ID: 9465290, updated on 17-May-2024

    Summary

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    Gene symbol
    PITG_16659
    Gene description
    DNA-directed RNA polymerase I and III subunit RPAC1, putative
    Locus tag
    PITG_16659
    See related
    FungiDB:PITG_16659; VEuPathDB:PITG_16659
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Phytophthora infestans T30-4 (strain: T30-4)
    Lineage
    Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae; Phytophthora
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    Genomic context

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    See PITG_16659 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_003303708.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene DNA-directed RNA polymerases I and III 40 kDa polypeptide Neighboring gene uncharacterized protein Neighboring gene phosphate carrier protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003303708.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase I activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase III activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase I complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of RNA polymerase III complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase I and III subunit RPAC1, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003303708.1 Reference assembly

      Range
      332235..333413 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002896844.1 → XP_002896890.1  DNA-directed RNA polymerase I and III subunit RPAC1, putative [Phytophthora infestans T30-4]

      See identical proteins and their annotated locations for XP_002896890.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A833WMC5, D0NVB2
      Conserved Domains (2) summary
      cd07032
      Location:33 → 317
      RNAP_I_II_AC40; AC40 subunit of Eukaryotic RNA polymerase (RNAP) I and RNAP III
      smart00662
      Location:44 → 313
      RPOLD; RNA polymerases D
    Nucleotide Protein
    Heading Accession and Version

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