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    LOC9651888 regulatory-associated protein of TOR 1 [ Selaginella moellendorffii ]

    Gene ID: 9651888, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC9651888
    Gene description
    regulatory-associated protein of TOR 1
    Locus tag
    SELMODRAFT_183380
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Selaginella moellendorffii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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    Genomic context

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    See LOC9651888 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314345.1 (20326..25718, complement)

    NW_003314345.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9651952 Neighboring gene uncharacterized LOC112341477 Neighboring gene F-box protein At1g70590 Neighboring gene uncharacterized LOC9651890 Neighboring gene uncharacterized protein At3g49140-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003314345 Unplaced Scaffold Reference v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein-macromolecule adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in TOR signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to amino acid stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to starvation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell growth IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TORC1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    regulatory-associated protein of TOR 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v1.0

    Genomic

    1. NW_003314345.1 Reference v1.0

      Range
      20326..25718 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024661630.1 → XP_024517398.1  regulatory-associated protein of TOR 1 isoform X3

      UniProtKB/TrEMBL
      D8SWN2

    2. XM_024661627.1 → XP_024517395.1  regulatory-associated protein of TOR 1 isoform X1

    3. XM_024661629.1 → XP_024517397.1  regulatory-associated protein of TOR 1 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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