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    LOC9633767 ubiquitin carboxyl-terminal hydrolase 2 [ Selaginella moellendorffii ]

    Gene ID: 9633767, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC9633767
    Gene description
    ubiquitin carboxyl-terminal hydrolase 2
    Locus tag
    SELMODRAFT_2225
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Selaginella moellendorffii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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    Genomic context

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    See LOC9633767 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314375.1 (246362..249392, complement)

    NW_003314375.1Genomic Context describing neighboring genes Neighboring gene probable protein S-acyltransferase 16 Neighboring gene uncharacterized LOC112342663 Neighboring gene NAC domain-containing protein 72 Neighboring gene alpha-L-arabinofuranosidase 1 Neighboring gene uncharacterized LOC112342666 Neighboring gene uncharacterized LOC9633768 Neighboring gene RNA-directed DNA methylation 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003314375 Unplaced Scaffold Reference v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin carboxyl-terminal hydrolase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v1.0

    Genomic

    1. NW_003314375.1 Reference v1.0

      Range
      246362..249392 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024664820.1 → XP_024520588.1  ubiquitin carboxyl-terminal hydrolase 2

      Conserved Domains (2) summary
      pfam02148
      Location:106 → 169
      zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
      cl02553
      Location:691 → 923
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    Nucleotide Protein
    Heading Accession and Version

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