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    LOC100377917 protein phosphatase 1 regulatory subunit 42-like [ Saccoglossus kowalevskii ]

    Gene ID: 100377917, updated on 19-Oct-2023

    Summary

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    Gene symbol
    LOC100377917
    Gene description
    protein phosphatase 1 regulatory subunit 42-like
    See related
    EnsemblRapid:LOC100377917
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Saccoglossus kowalevskii
    Lineage
    Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
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    Genomic context

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    See LOC100377917 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003120918.1 (246790..269160, complement)

    NW_003120918.1Genomic Context describing neighboring genes Neighboring gene BMP-binding endothelial regulator protein-like Neighboring gene sulfotransferase 1C4-like Neighboring gene prolactin regulatory element-binding protein-like Neighboring gene centrosome and spindle pole-associated protein 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003120918 unplaced scaffold reference Skow_1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein phosphatase 1 regulatory subunit 42-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Skow_1.1 Primary Assembly

    Genomic

    1. NW_003120918.1 Reference Skow_1.1 Primary Assembly

      Range
      246790..269160 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006815004.1 → XP_006815067.1  protein phosphatase 1 regulatory subunit 42-like

      See identical proteins and their annotated locations for XP_006815067.1

      Related
      XP_006815067.1, XM_006815004.1
      Conserved Domains (4) summary
      cd00116
      Location:17 → 208
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:31 → 52
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:74 → 115
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:51 → 107
      LRR_8; Leucine rich repeat

    2. XM_002733566.2 → XP_002733612.1  protein phosphatase 1 regulatory subunit 42-like

      See identical proteins and their annotated locations for XP_002733612.1

      Related
      XP_002733612.1, XM_002733566.2
      Conserved Domains (4) summary
      cd00116
      Location:17 → 208
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:31 → 52
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:74 → 115
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:51 → 107
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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