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    PSPTO_RS09780 zinc-dependent alcohol dehydrogenase [ Pseudomonas syringae pv. tomato str. DC3000 ]

    Gene ID: 1183520, updated on 6-Jun-2024

    Summary

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    Gene symbol
    PSPTO_RS09780
    Gene description
    zinc-dependent alcohol dehydrogenase
    Locus tag
    PSPTO_RS09780
    Gene type
    protein coding
    Organism
    Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    PSPTO1875; PSPTO_1875
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    Genomic context

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    Sequence:
    NC_004578.1 (2049167..2050402, complement)

    NC_004578.1Genomic Context describing neighboring genes Neighboring gene GntR family transcriptional regulator Neighboring gene aspartate/glutamate racemase family protein Neighboring gene pseudo Neighboring gene IS3 family transposase Neighboring gene LysR family transcriptional regulator

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004578.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Medium- and short-chain dehydrogenase/reductase gene and protein families : the MDR superfamily. Persson B, et al. Cell Mol Life Sci, 2008 Dec. PMID 19011751, Free PMC Article
    2. Medium- and short-chain dehydrogenase/reductase gene and protein families : The role of zinc for alcohol dehydrogenase structure and function. Auld DS, et al. Cell Mol Life Sci, 2008 Dec. PMID 19011745, Free PMC Article
    3. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell CR, et al. Proc Natl Acad Sci U S A, 2003 Sep 2. PMID 12928499, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    zinc-dependent alcohol dehydrogenase
    WP_005767816.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004578.1 Reference assembly

      Range
      2049167..2050402 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005767816.1 MULTISPECIES: zinc-dependent alcohol dehydrogenase [Pseudomonas]

      See identical proteins and their annotated locations for WP_005767816.1

      UniProtKB/TrEMBL
      A0A0P9JX25, A0A0P9UJ27, Q885F9
      Conserved Domains (1) summary
      cd08283
      Location:1 → 388
      FDH_like_1; Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1
    Nucleotide Protein
    Heading Accession and Version