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    PSPTO_RS06625 amino acid ABC transporter substrate-binding protein [ Pseudomonas syringae pv. tomato str. DC3000 ]

    Gene ID: 1182891, updated on 10-Oct-2024

    Summary

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    Gene symbol
    PSPTO_RS06625
    Gene description
    amino acid ABC transporter substrate-binding protein
    Locus tag
    PSPTO_RS06625
    Gene type
    protein coding
    Organism
    Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Old locus tag
    PSPTO1255; PSPTO_1255
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    Genomic context

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    Sequence:
    NC_004578.1 (1378253..1379281)

    NC_004578.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent RNA helicase RhlB Neighboring gene alpha/beta hydrolase Neighboring gene amino acid ABC transporter permease Neighboring gene amino acid ABC transporter permease

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004578.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell CR, et al. Proc Natl Acad Sci U S A, 2003 Sep 2. PMID 12928499, Free PMC Article
    2. The substrate-binding protein in bacterial ABC transporters: dissecting roles in the evolution of substrate specificity. Maqbool A, et al. Biochem Soc Trans, 2015 Oct. PMID 26517916
    3. Structure and mechanism of ABC transporters. Wilkens S. F1000Prime Rep, 2015. PMID 25750732, Free PMC Article
    4. Structural diversity of ABC transporters. ter Beek J, et al. J Gen Physiol, 2014 Apr. PMID 24638992, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    amino acid ABC transporter substrate-binding protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004578.1 Reference assembly

      Range
      1378253..1379281
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005764116.1 MULTISPECIES: amino acid ABC transporter substrate-binding protein [Pseudomonas]

      See identical proteins and their annotated locations for WP_005764116.1

      UniProtKB/TrEMBL
      A0A0N0WCA5, A0A0P9IGH4, A0A0P9JWL0, A0A0P9KUF3, A0A0Q0FAK5, A0A3M3YXY1, A0AAP1A471, A0AAP1TFJ1, Q887N6
      Conserved Domains (1) summary
      cd13692
      Location:29 → 264
      PBP2_BztA; Substrate bindng domain of ABC glutamate/glutamine/aspartate/asparagine transporter; the type 2 periplasmic binding protein fold
    Nucleotide Protein
    Heading Accession and Version

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