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    LOC115127120 hyccin 2-like [ Oncorhynchus nerka (sockeye salmon) ]

    Gene ID: 115127120, updated on 8-May-2024

    Summary

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    Gene symbol
    LOC115127120
    Gene description
    hyccin 2-like
    See related
    EnsemblRapid:ENSONEG00000013561
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oncorhynchus nerka
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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    Genomic context

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    See LOC115127120 in Genome Data Viewer
    Location:
    chromosome: LG3
    Exon count:
    12
    Annotation release Status Assembly LG Location
    RS_2024_05 current Oner_Uvic_2.0 (GCF_034236695.1) LG3 NC_088398.1 (87082224..87282966, complement)
    100 previous assembly Oner_1.0 (GCF_006149115.1) Unplaced Scaffold NW_021815486.1 (5239..20935, complement)

    Linkage Group LG3 - NC_088398.1Genomic Context describing neighboring genes Neighboring gene X-ray repair complementing defective repair in Chinese hamster cells 5 Neighboring gene uncharacterized LOC115122596 Neighboring gene neurexophilin-2-like Neighboring gene speckle-type POZ protein-like A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in phosphatidylinositol phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hyccin 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034236695.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Oner_Uvic_2.0 Primary Assembly

    Genomic

    1. NC_088398.1 Reference Oner_Uvic_2.0 Primary Assembly

      Range
      87082224..87282966 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_065016440.1 → XP_064872512.1  hyccin 2-like

    Nucleotide Protein
    Heading Accession and Version

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