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    LOC656754 lysosomal alpha-mannosidase [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 656754, updated on 12-Apr-2024

    Summary

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    Gene symbol
    LOC656754
    Gene description
    lysosomal alpha-mannosidase
    Locus tag
    TcasGA2_TC002467
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
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    Genomic context

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    See LOC656754 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 1 NC_087394.1 (4557479..4562163)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG3 NC_007418.3 (28030865..28035502, complement)

    Chromosome 1 - NC_087394.1Genomic Context describing neighboring genes Neighboring gene lysosomal alpha-mannosidase Neighboring gene lysosomal alpha-mannosidase Neighboring gene F-box/LRR-repeat protein 3 Neighboring gene zinc finger protein OZF Neighboring gene uncharacterized LOC135267928

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-mannosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mannose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysosomal alpha-mannosidase
    Names
    AUGUSTUS-3.0.2_02467
    GLEAN_02467
    Lysosomal alpha-mannosidase-like Protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087394.1 Reference icTriCast1.1 Primary Assembly

      Range
      4557479..4562163
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_963261.4 → XP_968354.2  lysosomal alpha-mannosidase

    Nucleotide Protein Strain
    Heading Accession and Version

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