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    LOC107817426 glyceraldehyde-3-phosphate dehydrogenase, cytosolic [ Nicotiana tabacum (common tobacco) ]

    Gene ID: 107817426, updated on 6-Jun-2024

    Summary

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    Gene symbol
    LOC107817426
    Gene description
    glyceraldehyde-3-phosphate dehydrogenase, cytosolic
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Nicotiana tabacum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
    Also known as
    GAPC
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    Genomic context

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    See LOC107817426 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015816297.1 (130656..133467, complement)

    NW_015816297.1Genomic Context describing neighboring genes Neighboring gene putative ankyrin repeat protein RF_0381 Neighboring gene pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like Neighboring gene uncharacterized LOC107817423

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015816297.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence in favor of the symbiotic origin of chloroplasts: primary structure and evolution of tobacco glyceraldehyde-3-phosphate dehydrogenases. Shih MC, et al. Cell, 1986 Oct 10. PMID 3757034
    2. Analysis of the Nicotiana tabacum stigma/style transcriptome reveals gene expression differences between wet and dry stigma species. Quiapim AC, et al. Plant Physiol, 2009 Mar. PMID 19052150, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glucose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glyceraldehyde-3-phosphate dehydrogenase, cytosolic
    Names
    glyceraldehyde 3-phosphate dehydrogenase
    XP_016498743.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001425942.1 → NP_001412871.1  glyceraldehyde-3-phosphate dehydrogenase, cytosolic

      Status: VALIDATED

      Source sequence(s)
      DV160483, DW003655, EB429099, HS082267
      UniProtKB/Swiss-Prot
      P09094
      UniProtKB/TrEMBL
      A0A1S4DBQ6

    RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ntab-TN90 Primary Assembly

    Genomic

    1. NW_015816297.1 Reference Ntab-TN90 Primary Assembly

      Range
      130656..133467 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016643257.1 → XP_016498743.1  glyceraldehyde-3-phosphate dehydrogenase, cytosolic

      Conserved Domains (3) summary
      PLN02358
      Location:3 → 337
      PLN02358; glyceraldehyde-3-phosphate dehydrogenase
      pfam00044
      Location:7 → 157
      Gp_dh_N; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
      pfam02800
      Location:162 → 319
      Gp_dh_C; Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P09094.1 GenPept UniProtKB/Swiss-Prot:P09094

    Gene LinkOut

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