U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component [ Bos taurus (domestic cattle) ]

    Gene ID: 533499, updated on 12-Oct-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    MMS19provided by VGNC
    Official Full Name
    MMS19 homolog, cytosolic iron-sulfur assembly componentprovided by VGNC
    Primary source
    VGNC:VGNC:31534
    See related
    Ensembl:ENSBTAG00000012704
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MMS19 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (18673681..18709346, complement)

    Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene exosome component 1 Neighboring gene zinc finger DHHC-type palmitoyltransferase 16 Neighboring gene small nucleolar RNA SNORA28 Neighboring gene ubiquitin domain containing 1 Neighboring gene ankyrin repeat domain 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Clone Names

    • MGC159372

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in iron-sulfur cluster assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein maturation by iron-sulfur cluster transfer IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of MMXD complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cytosolic [4Fe-4S] assembly targeting complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    MMS19 nucleotide excision repair protein homolog
    Names
    MMS19 nucleotide excision repair homolog
    MMS19-like protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001102157.2 → NP_001095627.1  MMS19 nucleotide excision repair protein homolog

      See identical proteins and their annotated locations for NP_001095627.1

      Status: PROVISIONAL

      Source sequence(s)
      BC149532
      UniProtKB/Swiss-Prot
      E1BP36
      Conserved Domains (1) summary
      pfam14500
      Location:53 → 311
      MMS19_N; Dos2-interacting transcription regulator of RNA-Pol-II

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      18673681..18709346 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010819904.4 → XP_010818206.1  MMS19 nucleotide excision repair protein homolog isoform X3

      UniProtKB/TrEMBL
      A0AAA9SRM5
      Related
      ENSBTAP00000089032.1, ENSBTAT00000101678.1
      Conserved Domains (2) summary
      pfam12460
      Location:467 → 875
      MMS19_C; RNAPII transcription regulator C-terminal
      pfam14500
      Location:53 → 224
      MMS19_N; Dos2-interacting transcription regulator of RNA-Pol-II

    2. XM_005225559.5 → XP_005225616.1  MMS19 nucleotide excision repair protein homolog isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LWP9
      Conserved Domains (2) summary
      pfam12460
      Location:553 → 961
      MMS19_C; RNAPII transcription regulator C-terminal
      pfam14500
      Location:53 → 311
      MMS19_N; Dos2-interacting transcription regulator of RNA-Pol-II

    3. XM_005225558.5 → XP_005225615.1  MMS19 nucleotide excision repair protein homolog isoform X1

      See identical proteins and their annotated locations for XP_005225615.1

      UniProtKB/Swiss-Prot
      A6QPX1, E1BP36, F1MUW1
      UniProtKB/TrEMBL
      A0A3Q1LWP9
      Related
      ENSBTAP00000053458.3, ENSBTAT00000061179.4
      Conserved Domains (2) summary
      pfam12460
      Location:554 → 962
      MMS19_C; RNAPII transcription regulator C-terminal
      pfam14500
      Location:53 → 311
      MMS19_N; Dos2-interacting transcription regulator of RNA-Pol-II

    4. XM_010819905.4 → XP_010818207.1  MMS19 nucleotide excision repair protein homolog isoform X4

      UniProtKB/TrEMBL
      A0A3Q1LWP9
      Conserved Domains (2) summary
      pfam12460
      Location:396 → 804
      MMS19_C; RNAPII transcription regulator C-terminal
      pfam14500
      Location:1 → 153
      MMS19_N; Dos2-interacting transcription regulator of RNA-Pol-II

    5. XM_024985669.2 → XP_024841437.1  MMS19 nucleotide excision repair protein homolog isoform X5

      Conserved Domains (1) summary
      pfam12460
      Location:190 → 598
      MMS19_C; RNAPII transcription regulator C-terminal

    6. XM_059881883.1 → XP_059737866.1  MMS19 nucleotide excision repair protein homolog isoform X5

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E1BP36.3 GenPept UniProtKB/Swiss-Prot:E1BP36

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials