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    CAPN3 calpain 3 [ Mustela lutreola (European mink) ]

    Gene ID: 131836166, updated on 28-Mar-2024

    Summary

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    Gene symbol
    CAPN3
    Gene description
    calpain 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mustela lutreola
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
    Orthologs
    human mouse all
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    Genomic context

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    See CAPN3 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    RS_2023_08 current mMusLut2.pri (GCF_030435805.1) 7 NC_081296.1 (68606932..68657475)

    Chromosome 7 - NC_081296.1Genomic Context describing neighboring genes Neighboring gene glucosidase alpha, neutral C Neighboring gene U4 spliceosomal RNA Neighboring gene small ribosomal subunit protein eS7-like Neighboring gene zinc finger protein 106 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene synaptosome associated protein 23 Neighboring gene U4 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_081296.1 Chromosome 7 Reference mMusLut2.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calpain-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030435805.1-RS_2023_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMusLut2.pri

    Genomic

    1. NC_081296.1 Reference mMusLut2.pri

      Range
      68606932..68657475
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059181272.1 → XP_059037255.1  calpain-3 isoform X1

    2. XM_059181273.1 → XP_059037256.1  calpain-3 isoform X2

    3. XM_059181274.1 → XP_059037257.1  calpain-3 isoform X3

    4. XM_059181275.1 → XP_059037258.1  calpain-3 isoform X4

    5. XM_059181276.1 → XP_059037259.1  calpain-3 isoform X5

    6. XM_059181278.1 → XP_059037261.1  calpain-3 isoform X6

    7. XM_059181277.1 → XP_059037260.1  calpain-3 isoform X6

    8. XM_059181279.1 → XP_059037262.1  calpain-3 isoform X7

    Nucleotide Protein
    Heading Accession and Version

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