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    tlr18 toll-like receptor 18 [ Onychostoma macrolepis ]

    Gene ID: 131521342, updated on 28-Mar-2024

    Summary

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    Gene symbol
    tlr18
    Gene description
    toll-like receptor 18
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Onychostoma macrolepis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Acrossocheilinae; Onychostoma
    Orthologs
    zebrafish all
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    Genomic context

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    See tlr18 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_08 current ASM1243209v1 (GCF_012432095.1) 16 NC_081170.1 (14725458..14732509)

    Chromosome 16 - NC_081170.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat and Ig domain containing 4b Neighboring gene uncharacterized LOC131521344 Neighboring gene S100 calcium binding protein A1 Neighboring gene methyltransferase like 25B Neighboring gene interferon stimulated exonuclease gene 20-like 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_081170.1 Chromosome 16 Reference ASM1243209v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in toll-like receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    toll-like receptor 18

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_012432095.1-RS_2023_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1243209v1 Primary Assembly

    Genomic

    1. NC_081170.1 Reference ASM1243209v1 Primary Assembly

      Range
      14725458..14732509
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_058745961.1 → XP_058601944.1  toll-like receptor 18 isoform X1

    2. XM_058745962.1 → XP_058601945.1  toll-like receptor 18 isoform X2

    3. XM_058745963.1 → XP_058601946.1  toll-like receptor 18 isoform X3

    RNA

    1. XR_009266269.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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