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    si:dkey-121b10.7 heparan sulfate glucosamine 3-O-sulfotransferase 6 [ Triplophysa rosa ]

    Gene ID: 130553320, updated on 10-Jul-2024

    Summary

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    Gene symbol
    si:dkey-121b10.7
    Gene description
    heparan sulfate glucosamine 3-O-sulfotransferase 6
    Locus tag
    IRJ41_001679
    See related
    EnsemblRapid:ENSTRSG00005021331
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Triplophysa rosa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
    Orthologs
    zebrafish all
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    Genomic context

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    See si:dkey-121b10.7 in Genome Data Viewer
    Location:
    chromosome: LG4
    Exon count:
    2
    Annotation release Status Assembly LG Location
    RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG4 NC_079893.1 (26113206..26127489)

    Linkage Group LG4 - NC_079893.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 86 Neighboring gene mucin-2 Neighboring gene phospholipase D family, member 6 Neighboring gene RAB3D, member RAS oncogene family, a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_079893.1 Chromosome LG4 Reference Trosa_1v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heparan sulfate glucosamine 3-O-sulfotransferase 6
    Names
    putative heparan sulfate glucosamine 3-O-sulfotransferase 3B1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Trosa_1v2 Primary Assembly

    Genomic

    1. NC_079893.1 Reference Trosa_1v2 Primary Assembly

      Range
      26113206..26127489
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_057332218.1 → XP_057188201.1  heparan sulfate glucosamine 3-O-sulfotransferase 6

      UniProtKB/TrEMBL
      A0A9W7WYE0
      Related
      ENSTRSP00005056034.1, ENSTRST00005059169.1
    Nucleotide Protein
    Heading Accession and Version

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