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    CG6933 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40214, updated on 22-Aug-2024

    Summary

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    Official Symbol
    CG6933provided by FlyBase
    Primary source
    FLYBASE:FBgn0036952
    Locus tag
    Dmel_CG6933
    See related
    AllianceGenome:FB:FBgn0036952
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6933
    Summary
    Predicted to enable chitin binding activity. Predicted to be located in extracellular region. Is expressed in embryonic proventriculus; embryonic/larval midgut; and gastric caecum. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    Location:
    77A2-77A2; 3-47 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20218500..20220420, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20211600..20213520, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR32224 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Biomimetic Glue Protein Modulates Hepatic Gene Expression. Lu Y, et al. Macromol Biosci, 2021 Mar. PMID 33393184
    2. Analysis of hunger-driven gene expression in the Drosophila melanogaster larval central nervous system. Ryuda M, et al. Zoolog Sci, 2008 Jul. PMID 18828662
    3. High-resolution 3D spatiotemporal transcriptomic maps of developing Drosophila embryos and larvae. Wang M, et al. Dev Cell, 2022 May 23. PMID 35512700
    4. Micro-RNA Clusters Integrate Evolutionary Constraints on Expression and Target Affinities: The miR-6/5/4/286/3/309 Cluster in Drosophila. Zhe Q, et al. Mol Biol Evol, 2020 Oct 1. PMID 32521021
    5. Identification of miR-305, a microRNA that promotes aging, and its target mRNAs in Drosophila. Ueda M, et al. Genes Cells, 2018 Feb. PMID 29314553

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6933-PA
    CG6933-PB
    CG6933-PC
    CG6933-PD
    CG6933-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      20218500..20220420 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140934.2 → NP_649191.1  uncharacterized protein Dmel_CG6933, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649191.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IQV7
      Related
      FBpp0074622
      Conserved Domains (1) summary
      smart00494
      Location:32 → 78
      ChtBD2; Chitin-binding domain type 2

    2. NM_001275167.1 → NP_001262096.1  uncharacterized protein Dmel_CG6933, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262096.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MR04
      Conserved Domains (1) summary
      smart00494
      Location:32 → 78
      ChtBD2; Chitin-binding domain type 2

    3. NM_001275168.1 → NP_001262097.1  uncharacterized protein Dmel_CG6933, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262097.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VW94
      Conserved Domains (1) summary
      smart00494
      Location:44 → 90
      ChtBD2; Chitin-binding domain type 2

    4. NM_168834.1 → NP_730495.1  uncharacterized protein Dmel_CG6933, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730495.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VW94
      Related
      FBpp0074623, FBtr0074854
      Conserved Domains (1) summary
      smart00494
      Location:44 → 90
      ChtBD2; Chitin-binding domain type 2

    5. NM_168833.1 → NP_730494.1  uncharacterized protein Dmel_CG6933, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730494.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MR04
      Related
      FBpp0074624, FBtr0074855
      Conserved Domains (1) summary
      smart00494
      Location:32 → 78
      ChtBD2; Chitin-binding domain type 2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IQV7 Q8IQV7
    Q8MR04 Q8MR04
    Q9VW94 Q9VW94

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