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    CTBP1 C-terminal binding protein 1 [ Pteronotus mesoamericanus ]

    Gene ID: 129077475, updated on 5-Apr-2024

    Summary

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    Gene symbol
    CTBP1
    Gene description
    C-terminal binding protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pteronotus mesoamericanus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Mormoopidae; Pteronotus
    Orthologs
    human mouse all
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    Genomic context

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    See CTBP1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_03 current CSHL_Meso_final (GCF_021234165.1) Unplaced Scaffold NW_026555234.1 (405688..427222, complement)

    NW_026555234.1Genomic Context describing neighboring genes Neighboring gene transmembrane emp24 domain-containing protein 11 Neighboring gene spondin 2 Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene UV stimulated scaffold protein A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026555234 Unplaced Scaffold Reference CSHL_Meso_final

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coregulator binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_021234165.1-RS_2024_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CSHL_Meso_final

    Genomic

    1. NW_026555234.1 Reference CSHL_Meso_final

      Range
      405688..427222 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054581854.1 → XP_054437829.1  C-terminal-binding protein 1 isoform X3

    2. XM_054581852.1 → XP_054437827.1  C-terminal-binding protein 1 isoform X2

    3. XM_054581851.1 → XP_054437826.1  C-terminal-binding protein 1 isoform X1

    4. XM_054581853.1 → XP_054437828.1  C-terminal-binding protein 1 isoform X3

    Nucleotide Protein
    Heading Accession and Version

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