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    ASPH aspartate beta-hydroxylase [ Desmodus rotundus (common vampire bat) ]

    Gene ID: 112315321, updated on 30-Mar-2024

    Summary

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    Gene symbol
    ASPH
    Gene description
    aspartate beta-hydroxylase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Desmodus rotundus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
    Orthologs
    human mouse all
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    Genomic context

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    See ASPH in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    RS_2023_02 current HLdesRot8A (GCF_022682495.1) 8 NC_071394.1 (41425656..41630029)
    101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020093479.1 (5767279..5975928, complement)

    Chromosome 8 - NC_071394.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123477849 Neighboring gene uncharacterized LOC123477884 Neighboring gene clavesin 1 Neighboring gene probable sodium-coupled neutral amino acid transporter 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptidyl-aspartic acid 3-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-aspartic acid hydroxylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aspartyl/asparaginyl beta-hydroxylase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HLdesRot8A Primary Assembly

    Genomic

    1. NC_071394.1 Reference HLdesRot8A Primary Assembly

      Range
      41425656..41630029
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_053929583.1 → XP_053785558.1  aspartyl/asparaginyl beta-hydroxylase isoform X11

    2. XM_045204921.2 → XP_045060856.2  aspartyl/asparaginyl beta-hydroxylase isoform X7

    3. XM_053929584.1 → XP_053785559.1  aspartyl/asparaginyl beta-hydroxylase isoform X12

    4. XM_045204916.2 → XP_045060851.2  aspartyl/asparaginyl beta-hydroxylase isoform X1

    5. XM_053929582.1 → XP_053785557.1  aspartyl/asparaginyl beta-hydroxylase isoform X10

    6. XM_024572000.3 → XP_024427768.3  aspartyl/asparaginyl beta-hydroxylase isoform X9

    7. XM_053929580.1 → XP_053785555.1  aspartyl/asparaginyl beta-hydroxylase isoform X2

    8. XM_045204919.2 → XP_045060854.2  aspartyl/asparaginyl beta-hydroxylase isoform X5

    9. XM_053929581.1 → XP_053785556.1  aspartyl/asparaginyl beta-hydroxylase isoform X8

    10. XM_045204917.2 → XP_045060852.2  aspartyl/asparaginyl beta-hydroxylase isoform X3

    11. XM_045204918.2 → XP_045060853.2  aspartyl/asparaginyl beta-hydroxylase isoform X4

    12. XM_053929585.1 → XP_053785560.1  aspartyl/asparaginyl beta-hydroxylase isoform X13

    13. XM_045204920.2 → XP_045060855.2  aspartyl/asparaginyl beta-hydroxylase isoform X6

    Nucleotide Protein
    Heading Accession and Version

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