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    LOC113530023 torsin-1A-interacting protein 2 [ Pangasianodon hypophthalmus (striped catfish) ]

    Gene ID: 113530023, updated on 6-Jun-2024

    Summary

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    Gene symbol
    LOC113530023
    Gene description
    torsin-1A-interacting protein 2
    Locus tag
    PHYPO_G00232060
    See related
    EnsemblRapid:ENSPHYG00025027292
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pangasianodon hypophthalmus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
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    Genomic context

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    See LOC113530023 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 8 NC_069717.1 (11353332..11359334, complement)

    Chromosome 8 - NC_069717.1Genomic Context describing neighboring genes Neighboring gene DEP domain containing 1a Neighboring gene putative ferric-chelate reductase 1 Neighboring gene uncharacterized LOC113530036 Neighboring gene aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_069717.1 Chromosome 8 Reference fPanHyp1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in membrane organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    torsin-1A-interacting protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fPanHyp1.pri

    Genomic

    1. NC_069717.1 Reference fPanHyp1.pri

      Range
      11353332..11359334 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034306672.2 → XP_034162563.2  torsin-1A-interacting protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A5N5NM78

    2. XM_026919704.3 → XP_026775505.3  torsin-1A-interacting protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A5N5NM78
      Related
      ENSPHYP00025058333.1, ENSPHYT00025066407.1

    3. XM_026919695.3 → XP_026775496.3  torsin-1A-interacting protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A5N5NM78
      Related
      ENSPHYP00025058337.1, ENSPHYT00025066414.1
    Nucleotide Protein
    Heading Accession and Version

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