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    TSTA_050480 allantoate permease, putative [ Talaromyces stipitatus ATCC 10500 ]

    Gene ID: 8109090, updated on 17-May-2024

    Summary

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    Gene symbol
    TSTA_050480
    Gene description
    allantoate permease, putative
    Locus tag
    TSTA_050480
    See related
    FungiDB:TSTA_050480; VEuPathDB:TSTA_050480
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Talaromyces stipitatus ATCC 10500 (strain: ATCC 10500, culture-collection: ATCC:10500, type-material: type material of Talaromyces stipitatus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces; Talaromyces sect. Talaromyces
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    Genomic context

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    See TSTA_050480 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_002990118.1Genomic Context describing neighboring genes Neighboring gene 12-oxophytodienoate reductase opr, putative Neighboring gene uncharacterized protein Neighboring gene oxidoreductase, 2OG-Fe(II) oxygenase family, putative Neighboring gene glucose transporter, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_002990118.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    allantoate permease, putative
    XP_002485562.1
    • encoded by transcript TSTA_050480A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_002990118.1 Reference assembly

      Range
      2712753..2714201 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002485517.1 → XP_002485562.1  allantoate permease, putative [Talaromyces stipitatus ATCC 10500]

      See identical proteins and their annotated locations for XP_002485562.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B8MIU7
      Conserved Domains (2) summary
      cd06174
      Location:35 → 409
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      TIGR00893
      Location:40 → 409
      2A0114; D-galactonate transporter
    Nucleotide Protein
    Heading Accession and Version

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