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    SNX13 sorting nexin 13 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100345245, updated on 8-Mar-2024

    Summary

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    Gene symbol
    SNX13
    Gene description
    sorting nexin 13
    See related
    Ensembl:ENSOCUG00000001142
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See SNX13 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 10 NC_067383.1 (87954..228500, complement)

    Chromosome 10 - NC_067383.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127492593 Neighboring gene short coiled-coil protein-like Neighboring gene uncharacterized LOC127492656 Neighboring gene phosphoribosyl pyrophosphate synthetase 1 like 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067383.1 Chromosome 10 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067383.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      87954..228500 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051853221.1 → XP_051709181.1  sorting nexin-13 isoform X10

    2. XM_051853217.1 → XP_051709177.1  sorting nexin-13 isoform X8

    3. XM_051853220.1 → XP_051709180.1  sorting nexin-13 isoform X9

    4. XM_051853215.1 → XP_051709175.1  sorting nexin-13 isoform X6

    5. XM_051853212.1 → XP_051709172.1  sorting nexin-13 isoform X5

    6. XM_051853214.1 → XP_051709174.1  sorting nexin-13 isoform X5

    7. XM_051853213.1 → XP_051709173.1  sorting nexin-13 isoform X5

    8. XM_051853222.1 → XP_051709182.1  sorting nexin-13 isoform X11

    9. XM_051853218.1 → XP_051709178.1  sorting nexin-13 isoform X8

    10. XM_051853210.1 → XP_051709170.1  sorting nexin-13 isoform X3

    11. XM_051853207.1 → XP_051709167.1  sorting nexin-13 isoform X1

    12. XM_051853209.1 → XP_051709169.1  sorting nexin-13 isoform X2

    13. XM_051853211.1 → XP_051709171.1  sorting nexin-13 isoform X4

    14. XM_051853216.1 → XP_051709176.1  sorting nexin-13 isoform X7

    15. XM_051853223.1 → XP_051709183.1  sorting nexin-13 isoform X12

    Nucleotide Protein
    Heading Accession and Version

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