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    LOC103503689 pre-rRNA-processing protein TSR2 [ Cucumis melo (muskmelon) ]

    Gene ID: 103503689, updated on 6-Jun-2024

    Summary

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    Gene symbol
    LOC103503689
    Gene description
    pre-rRNA-processing protein TSR2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis melo
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC103503689 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 4 NC_066860.1 (2268985..2272322)
    101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007547663.1 (2244616..2247862)

    Chromosome 4 - NC_066860.1Genomic Context describing neighboring genes Neighboring gene homeobox-leucine zipper protein ATHB-6-like Neighboring gene uncharacterized LOC103503688 Neighboring gene O-fucosyltransferase 7-like Neighboring gene thylakoid lumenal 29 kDa protein, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pre-rRNA-processing protein TSR2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Genomic

    1. NC_066860.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

      Range
      2268985..2272322
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017047994.2 → XP_016903483.2  pre-rRNA-processing protein TSR2

      UniProtKB/TrEMBL
      A0A1S4E5H6, A0A5D3E598
    Nucleotide Protein
    Heading Accession and Version

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